What does he tell me this time?
She's posing a question. It's relatively simple.

We're just whores on a fucking assembly line.
Is "fucking" meant to describe the assembly line in a negative way? Or is that what the assembly line is? The bit about the whores throws me off.

Believe me I was there,
I'm sure you were.

Take what I want,
The mixing of past and present tense confuses me.

Get the fuck out of here.
No! This is my web site! You get out of here.

The trains won't
The trains won't...

Stop me
Morgan is admitting that she is, indeed, an alien. If you remember, Superman was "more powerful than a locomotive." And we all know that he was an alien. Since trains won't stop Morgan, she must be more powerful than them. So she is an alien.

The trains won't
The trains won't...

Stop
Even though they were defeated at the hands of Morgan, they still insist on fighting her. Apparently they crucify and don't learn. Ha ha ha ha!!! I made a funny...

Jonny's been a very bad boy. (x3)
He's not bad, he's just drawn that way. Ha ha ha ha!!! I made another funny....

Jonny's been a very bad..
Here, "bad" is used as a noun. It should be an adjective.

The sun is so high,
Morgan is advising you not to try to touch the sun. It's too high to reach. Besides, it's really hot and you'll burn your fingers.

My life is oblivious to you.
You haven't heard of Morgan before.

And the sun hits my eyes,
The sun has a killer 1-2-k.o. combo.

But remember you were not gonna...
You need to remember something you were not going to do. But since what you weren't going to do is not revealed, you probably don't know what you're not going to do. So it all works out.

The trains won't
Those silly trains again.

Stop me
That's because you're an alien.

The trains won't
Those accursed trains! Will they never go away?!?

Stop
I guess not...

And you look at me
You look at Morgan.

See through me,
Morgan can turn invisible. It must be one of her alien powers.

I am nothing to you.
Morgan is nothing to you.

You look at me
Again?

See through me,
Sheesh...

I am nothing to you.
Argh! Someone please stop the pain!

Intertwined with me,
You're playing Twister with Morgan.

You love you not me
You'd rather play Twister with yourself.

Even with my
Fragment sentence...

Eyes i take it in.
Even her eyes realize you don't want to play Twister with her.

Destroy this in me
There's something in Morgan that you need to destroy. Probably a small planet.

Please view us as we
Another fragment sentence...

All will go down
Whaaaaaat??!?!?!

Fighting for you.
My brain hurts.

What did we learn today?
Morgan is an alien. She battles trains and suns. But even her super power cannot make you want to play Twister with her.